Virtual Payroll
Processing & Compliance Services
Accurate Payroll Processing Typically 30-40% Below Traditional Firm Rates
Payroll processing, tax filings, and compliance—handled by CPAs who ensure every employee is paid accurately and every deadline is met. From setup to year-end W-2s, we’ve got it covered.
*Compared to traditional CPA firm rates. **On business day inquiries.
Payroll that runs itself, so you can run your business
Payroll isn’t just about cutting checks—it’s about compliance, cash flow, and keeping your team happy. Our CPA-supervised payroll services handle the complexity so you don’t have to.
From multi-state tax filings to contractor payments, we ensure accuracy, timeliness, and full compliance with federal and state regulations. No more penalty notices, no more missed deadlines, no more payroll stress.
Explore Payroll Services100% On-Time Guarantee
Every payroll processed on schedule, every time. Your employees get paid accurately and on time—no exceptions.
Full Tax Compliance
Federal, state, and local payroll taxes calculated, withheld, and filed automatically. 941s, W-2s, 1099s—all handled.
Transparent Pricing
Flat monthly pricing based on employee count. No per-payroll fees, no hidden charges. 30-40% below traditional providers.
Responsive Support
24-hour response guarantee on business days. Questions about a garnishment, a new hire, or a tax notice? We’re here.
Payroll Services
Complete payroll processing, tax compliance, and workforce management for businesses of every size.
Payroll Processing
Reliable, accurate payroll—on time, every time. We handle calculations, deductions, direct deposits, and reporting so you can focus on growing your business.
Starter
1-5 employees
$99-$149/mo
Traditional: $150-$250/mo
- ✓ Bi-weekly or monthly processing
- ✓ Direct deposit included
- ✓ Federal & state tax withholding
- ✓ Pay stubs for all employees
- ✓ Basic reporting
Growth
6-15 employees
$199-$299/mo
Traditional: $300-$500/mo
- ✓ All Starter features
- ✓ Bi-weekly processing standard
- ✓ PTO & sick leave tracking
- ✓ Garnishment management
- ✓ New hire onboarding docs
- ✓ Custom reporting
Scale
16-50 employees
$399-$599/mo
Traditional: $600-$1,000/mo
- ✓ All Growth features
- ✓ Multi-state payroll
- ✓ Department-level reporting
- ✓ Benefits administration support
- ✓ Dedicated payroll specialist
Enterprise
50+ employees
Custom Quote
- ✓ All Scale features
- ✓ Multi-entity payroll
- ✓ Custom integrations
- ✓ Priority processing
- ✓ Quarterly payroll reviews
How It Works
We Set Up Your Payroll
Complete system setup, employee onboarding, and tax registration
You Approve Each Run
Review hours and changes, then approve with one click
We Process & File
Payments processed, taxes calculated, filings submitted
Employees Get Paid
Direct deposits hit on schedule, pay stubs available instantly
Payroll System Setup
Starting payroll for the first time, or switching from a provider that’s not working? We handle the entire setup—tax registrations, employee onboarding, system configuration—so your first payroll runs perfectly.
New Business Setup
Starting from scratch
$350-$500
Traditional: $500-$800
- ✓ Federal & state tax registration
- ✓ EIN setup assistance
- ✓ Up to 5 employee entries
- ✓ Direct deposit setup
- ✓ First payroll test run
Provider Migration
Switching from another service
$500-$750
Traditional: $750-$1,200
- ✓ All New Business Setup
- ✓ Historical data migration
- ✓ YTD balance transfer
- ✓ Existing employee onboarding
- ✓ Prior quarter reconciliation
Complex Setup
Multi-state or 15+ employees
$750-$1,200
Traditional: $1,000-$2,000
- ✓ All Migration features
- ✓ Multi-state registration
- ✓ Benefits setup & mapping
- ✓ Custom pay schedules
- ✓ Department configuration
Payroll Tax Filing & Compliance
Payroll tax mistakes are expensive—penalties, interest, and IRS notices add up fast. Our CPA-supervised team ensures every filing is accurate and on time.
Key Payroll Tax Deadlines
Quarterly Filings
Form 941 + state filings
Included
With any processing plan
All quarterly federal and state payroll tax filings included with any payroll processing plan.
Year-End Package
W-2s + reconciliation
$295-$495/yr
Traditional: $400-$800
- ✓ W-2 preparation for all employees
- ✓ W-3 transmittal filing
- ✓ Annual reconciliation
- ✓ State annual filings
- ✓ Employee W-2 distribution
Compliance Cleanup
Unfiled or late payroll taxes
$500-$1,500
Traditional: $1,000-$3,000
- ✓ Unfiled payroll tax returns
- ✓ Penalty abatement requests
- ✓ Payment plan setup
- ✓ State compliance catch-up
- ✓ IRS correspondence handling
Contractor Payroll & 1099 Services
Hiring contractors? We handle the compliance so you don’t have to worry about misclassification, missing forms, or IRS penalties.
1099 Filing Only
Year-end preparation
$25-$35/form
Traditional: $40-$60/form
- ✓ 1099-NEC preparation
- ✓ E-filing with IRS
- ✓ Recipient copy mailing
- ✓ State filing included
Contractor Management
Ongoing compliance
$149-$249/mo
Traditional: $250-$400/mo
- ✓ W-9 collection & tracking
- ✓ Payment processing
- ✓ 1099 preparation included
- ✓ Classification guidance
- ✓ Compliance monitoring
Struggling With Payroll Headaches?
Research shows 40% of small businesses incur payroll tax penalties each year, costing an average of $845 per penalty. Manual payroll processing increases error rates by up to 8x.
Sound Familiar?
You deserve payroll that runs itself—accurately and on time
How Omicron CPA Is Different
We built our payroll services to eliminate these frustrations. CPA-supervised processing, automated compliance, and transparent pricing—not a DIY platform with a help desk.
✓ 100% On-Time, Every Time
Our guaranteed processing schedule means your team gets paid on time, every pay period. Automated tax calculations and filings ensure you never face a penalty for late or incorrect submissions.
“Haven’t missed a single payroll deadline since switching to Omicron. Zero penalties in 18 months.”
— Sarah M., Restaurant Owner
✓ Transparent Flat-Rate Pricing
One monthly fee covers everything—processing, tax filings, direct deposits, and support. No per-payroll charges, no per-employee surcharges hiding in the fine print.
“Was paying $450/month for 8 employees with our old provider. Omicron handles it for $249 with better service.”
— James T., Construction Company
✓ CPA-Supervised Compliance
Unlike software-only solutions, every payroll is reviewed by our CPA team. Multi-state compliance, garnishment handling, and year-end reconciliation are managed by professionals—not algorithms.
“When we expanded to three states, Omicron handled all the registrations and compliance automatically.”
— Lisa C., Marketing Agency
Clients Average $2,400/Year in Savings vs. Traditional Payroll Providers
View Our Payroll ServicesOmicron CPA’s payroll professionals provide the following services:
- Payroll processing for salaried, hourly, and commissioned employees
- Multi-state payroll tax calculation, withholding, and compliance
- Direct deposit processing and pay stub generation
- Quarterly federal (Form 941) and state payroll tax filings
- Annual W-2 and W-3 preparation, filing, and employee distribution
- 1099-NEC preparation and filing for independent contractors
- New payroll system setup, state registration, and migration from existing providers
- Garnishment, deduction, and benefits administration management
- Year-end payroll reconciliation and compliance review
- Integration of payroll data with bookkeeping, tax preparation, and CFO advisory services
By understanding the unique payroll needs of each industry we serve…
…we deliver solutions that go beyond basic processing. We work with restaurants, construction companies, e-commerce businesses, professional service firms, and startups—where tip reporting, prevailing wage, multi-state compliance, and rapid headcount changes require specialized expertise. Our CPA-supervised approach ensures your payroll stays compliant as your business grows, across every state you operate in.
What Our Payroll Clients Say
Real results from businesses that switched their payroll to Omicron CPA.
Our CPA-supervised payroll team…
…combines tax expertise with payroll technology to deliver a service that’s more than just processing. We understand how payroll connects to your tax strategy, bookkeeping, and cash flow—because we manage those too. Every payroll run is reviewed for accuracy, every tax filing is verified for compliance, and every year-end package is reconciled against your books. That’s the difference between a payroll provider and a CPA-managed payroll partner.
Frequently Asked Questions
Common questions about our payroll services.